Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H3AP68431 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
HIST1H3AP68431 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 CHMP1AP1-201ENST00000445563 662 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 COX20P2-201ENST00000452636 358 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 AC005225.4-201ENST00000557330 545 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 AC106886.1-201ENST00000568660 600 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 AL358472.3-201ENST00000608147 415 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 ZACNP1-201ENST00000612259 710 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 RHOXF1P1-202ENST00000635473 501 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 AL137784.3-201ENST00000623858 2288 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 TCAM1P-207ENST00000485295 1537 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 AC009093.10-201ENST00000641956 1442 ntBASIC12.87□□□□□ -0.35
HIST1H3AP68431 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H3AP68431 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H3AP68431 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC011498.7-201ENST00000624986 2027 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AL035633.1-201ENST00000406139 838 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms