Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.91□□□□□ -0.34
GDNFP39905 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.91□□□□□ -0.34
GDNFP39905 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.91□□□□□ -0.34
GDNFP39905 RPL13P2-201ENST00000440687 659 ntBASIC12.91□□□□□ -0.34
GDNFP39905 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.91□□□□□ -0.34
GDNFP39905 AC009477.1-201ENST00000452936 217 ntBASIC12.91□□□□□ -0.34
GDNFP39905 SLED1-202ENST00000512051 380 ntBASIC12.91□□□□□ -0.34
GDNFP39905 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.91□□□□□ -0.34
GDNFP39905 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.91□□□□□ -0.34
GDNFP39905 AC009407.1-201ENST00000568958 598 ntBASIC12.91□□□□□ -0.34
GDNFP39905 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.91□□□□□ -0.34
GDNFP39905 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
GDNFP39905 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
GDNFP39905 MIR497HG-202ENST00000572453 3838 ntBASIC12.91□□□□□ -0.34
GDNFP39905 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GDNFP39905 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GDNFP39905 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GDNFP39905 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.9□□□□□ -0.34
GDNFP39905 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.9□□□□□ -0.34
GDNFP39905 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.9□□□□□ -0.34
GDNFP39905 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 CYMP-203ENST00000474680 1263 ntBASIC12.9□□□□□ -0.34
GDNFP39905 AC004890.2-204ENST00000481968 304 ntBASIC12.9□□□□□ -0.34
GDNFP39905 AC120057.1-201ENST00000483947 663 ntBASIC12.9□□□□□ -0.34
GDNFP39905 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 SPDYE18-201ENST00000510091 1050 ntBASIC12.9□□□□□ -0.34
GDNFP39905 SDHAP3-202ENST00000515467 728 ntBASIC12.9□□□□□ -0.34
GDNFP39905 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms