Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCRP04035 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCRP04035 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCRP04035 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.45■□□□□ 0.22
HMGCRP04035 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.45■□□□□ 0.22
HMGCRP04035 AP000845.1-201ENST00000581677 2131 ntBASIC16.45■□□□□ 0.22
HMGCRP04035 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCRP04035 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCRP04035 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCRP04035 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCRP04035 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HMGCRP04035 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HMGCRP04035 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HMGCRP04035 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A21P-201ENST00000510875 1396 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A15P-201ENST00000514465 1395 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A6P-201ENST00000515148 1394 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A16P-201ENST00000526662 1395 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A9P-201ENST00000527940 1395 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A5P-201ENST00000528738 1395 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A14P-201ENST00000530386 1395 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 FAM90A13P-201ENST00000534703 1395 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCRP04035 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCRP04035 DDX39AP1-201ENST00000445147 1181 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCRP04035 AC093909.3-201ENST00000504783 336 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
HMGCRP04035 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 AC007952.4-201ENST00000573866 637 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 MIR2392-201ENST00000584881 84 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HMGCRP04035 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HMGCRP04035 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCRP04035 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCRP04035 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 AC006486.2-201ENST00000624246 2199 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 AC009093.10-201ENST00000641956 1442 ntBASIC16.44■□□□□ 0.22
HMGCRP04035 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HMGCRP04035 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCRP04035 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCRP04035 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 KRT8P28-201ENST00000433288 1390 ntBASIC16.43■□□□□ 0.22
HMGCRP04035 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCRP04035 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMGCRP04035 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HMGCRP04035 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HMGCRP04035 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HMGCRP04035 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 AC073869.2-201ENST00000417338 1026 ntBASIC16.43■□□□□ 0.22
HMGCRP04035 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCRP04035 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.43■□□□□ 0.22
HMGCRP04035 RPL35P9-201ENST00000446059 350 ntBASIC16.43■□□□□ 0.22
HMGCRP04035 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.43■□□□□ 0.22
HMGCRP04035 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.43■□□□□ 0.22
HMGCRP04035 RPL18AP8-201ENST00000486071 528 ntBASIC16.43■□□□□ 0.22
HMGCRP04035 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
HMGCRP04035 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCRP04035 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms