Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.11□□□□□ -0.15
CLOCKO15516 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
CLOCKO15516 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.1□□□□□ -0.15
CLOCKO15516 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.1□□□□□ -0.15
CLOCKO15516 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.1□□□□□ -0.15
CLOCKO15516 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.1□□□□□ -0.15
CLOCKO15516 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CLOCKO15516 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 AC074044.1-201ENST00000609673 707 ntBASIC14.1□□□□□ -0.15
CLOCKO15516 AF228730.6-201ENST00000641497 218 ntBASIC14.1□□□□□ -0.15
CLOCKO15516 AC084121.3-201ENST00000641716 218 ntBASIC14.1□□□□□ -0.15
CLOCKO15516 AC105233.6-201ENST00000642093 218 ntBASIC14.1□□□□□ -0.15
CLOCKO15516 Z97205.2-201ENST00000564697 1639 ntBASIC14.1□□□□□ -0.15
CLOCKO15516 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CLOCKO15516 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.1□□□□□ -0.15
CLOCKO15516 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.1□□□□□ -0.15
CLOCKO15516 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLOCKO15516 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 AC004899.2-201ENST00000622993 3860 ntBASIC14.09□□□□□ -0.15
CLOCKO15516 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 AC073869.1-201ENST00000415574 2762 ntBASIC14.09□□□□□ -0.15
CLOCKO15516 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.09□□□□□ -0.15
CLOCKO15516 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.09□□□□□ -0.15
CLOCKO15516 AL080243.2-201ENST00000418783 582 ntBASIC14.09□□□□□ -0.15
CLOCKO15516 AC005034.1-201ENST00000426657 489 ntBASIC14.09□□□□□ -0.15
CLOCKO15516 SERBP1P3-201ENST00000459980 809 ntBASIC14.09□□□□□ -0.15
CLOCKO15516 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.09□□□□□ -0.15
CLOCKO15516 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.09□□□□□ -0.15
CLOCKO15516 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.09□□□□□ -0.15
CLOCKO15516 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.09□□□□□ -0.15
CLOCKO15516 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.09□□□□□ -0.15
CLOCKO15516 AC009118.2-201ENST00000613275 655 ntBASIC14.09□□□□□ -0.15
CLOCKO15516 MIR6069-201ENST00000620069 79 ntBASIC14.09□□□□□ -0.15
CLOCKO15516 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.09□□□□□ -0.15
CLOCKO15516 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLOCKO15516 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLOCKO15516 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms