Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 BRD7P5-201ENST00000299197 1822 ntBASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC19.49■□□□□ 0.71
NPC1L1Q9UHC9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 AC073150.1-201ENST00000450406 1084 ntBASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 AC090857.1-201ENST00000527400 390 ntBASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 AC027601.5-201ENST00000624065 2482 ntBASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1L1Q9UHC9 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 KRT8P1-201ENST00000557533 1207 ntBASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 AC242376.1-201ENST00000559033 726 ntBASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 AC091812.3-201ENST00000621362 345 ntBASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 KRT8P31-201ENST00000504812 1408 ntBASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NPC1L1Q9UHC9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 RN7SL11P-201ENST00000471305 293 ntBASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 RN7SL258P-201ENST00000478664 300 ntBASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.46■□□□□ 0.71
NPC1L1Q9UHC9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms