Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 IGHV3-42-201ENST00000520410 361 ntBASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 DUX4L47-201ENST00000566374 394 ntBASIC12.71□□□□□ -0.37
NICN1Q9BSH3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AC015911.4-201ENST00000588022 1070 ntBASIC12.71□□□□□ -0.37
NICN1Q9BSH3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AC004840.1-201ENST00000636359 365 ntBASIC12.71□□□□□ -0.37
NICN1Q9BSH3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 AC092053.3-201ENST00000641308 4975 ntBASIC12.71□□□□□ -0.37
NICN1Q9BSH3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NICN1Q9BSH3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NICN1Q9BSH3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 MYADML-201ENST00000474610 2147 ntBASIC12.7□□□□□ -0.38
NICN1Q9BSH3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC241585.1-201ENST00000433527 519 ntBASIC12.7□□□□□ -0.38
NICN1Q9BSH3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC026434.2-201ENST00000506094 1078 ntBASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC135586.1-201ENST00000539323 574 ntBASIC12.7□□□□□ -0.38
NICN1Q9BSH3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC008738.7-201ENST00000609744 511 ntBASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC004790.1-201ENST00000612686 536 ntBASIC12.7□□□□□ -0.38
NICN1Q9BSH3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.7□□□□□ -0.38
NICN1Q9BSH3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms