Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 PCDHB18P-202ENST00000526308 3197 ntBASIC13.34□□□□□ -0.27
APH1BQ8WW43 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 SORD2P-201ENST00000558556 1069 ntBASIC13.34□□□□□ -0.27
APH1BQ8WW43 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 AC126335.2-201ENST00000623362 4637 ntBASIC13.34□□□□□ -0.27
APH1BQ8WW43 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APH1BQ8WW43 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.34□□□□□ -0.27
APH1BQ8WW43 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APH1BQ8WW43 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APH1BQ8WW43 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
APH1BQ8WW43 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
APH1BQ8WW43 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
APH1BQ8WW43 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APH1BQ8WW43 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APH1BQ8WW43 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.33□□□□□ -0.27
APH1BQ8WW43 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 MIR940-201ENST00000401276 94 ntBASIC13.33□□□□□ -0.28
APH1BQ8WW43 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 AC023141.5-201ENST00000458585 616 ntBASIC13.33□□□□□ -0.28
APH1BQ8WW43 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 AP000344.2-201ENST00000512987 629 ntBASIC13.33□□□□□ -0.28
APH1BQ8WW43 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.33□□□□□ -0.28
APH1BQ8WW43 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 AC138969.2-201ENST00000532739 9932 ntBASIC13.33□□□□□ -0.28
APH1BQ8WW43 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APH1BQ8WW43 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms