Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 EEF1DP1-201ENST00000585891 896 ntBASIC15.68■□□□□ 0.1
LMO3Q8TAP4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 BEND3P1-201ENST00000421591 1944 ntBASIC15.68■□□□□ 0.1
LMO3Q8TAP4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 KRT223P-202ENST00000449164 1292 ntBASIC15.67■□□□□ 0.1
LMO3Q8TAP4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 TMEM198B-204ENST00000484016 896 ntBASIC15.67■□□□□ 0.1
LMO3Q8TAP4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO3Q8TAP4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 CYP4F23P-201ENST00000593402 1579 ntBASIC15.66■□□□□ 0.1
LMO3Q8TAP4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms