Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 AC092580.3-201ENST00000430932 139 ntBASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 AC241585.1-201ENST00000433527 519 ntBASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 AC097493.3-201ENST00000509725 367 ntBASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 IGHV3-42-201ENST00000520410 361 ntBASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 AL590560.3-201ENST00000623350 461 ntBASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 AL158212.4-201ENST00000624062 1286 ntBASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRIML2Q8N7C3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 AL645937.2-201ENST00000396808 931 ntBASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 TREML5P-201ENST00000421694 576 ntBASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 AL691403.2-201ENST00000618460 490 ntBASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIML2Q8N7C3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms