Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 REXO1L4P-201ENST00000605109 1937 ntBASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCDC36Q8IYA8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC36Q8IYA8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC36Q8IYA8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms