Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SCXQ7RTU7 AC000095.1-201ENST00000603208 874 ntBASIC9.9□□□□□ -0.82
SCXQ7RTU7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC9.9□□□□□ -0.82
SCXQ7RTU7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC9.9□□□□□ -0.82
SCXQ7RTU7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC9.9□□□□□ -0.82
SCXQ7RTU7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SCXQ7RTU7 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SCXQ7RTU7 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC9.9□□□□□ -0.82
SCXQ7RTU7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SCXQ7RTU7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SCXQ7RTU7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SCXQ7RTU7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SCXQ7RTU7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC9.9□□□□□ -0.82
SCXQ7RTU7 CYP2AB1P-202ENST00000454440 1456 ntBASIC9.9□□□□□ -0.83
SCXQ7RTU7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
SCXQ7RTU7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC9.9□□□□□ -0.83
SCXQ7RTU7 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.83
SCXQ7RTU7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SCXQ7RTU7 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
SCXQ7RTU7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC020658.6-201ENST00000623564 1870 ntBASIC9.89□□□□□ -0.83
SCXQ7RTU7 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC9.89□□□□□ -0.83
SCXQ7RTU7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AP001063.1-201ENST00000568332 529 ntBASIC9.89□□□□□ -0.83
SCXQ7RTU7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CLUHP6-201ENST00000580789 941 ntBASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC005252.2-201ENST00000624630 1141 ntBASIC9.89□□□□□ -0.83
SCXQ7RTU7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CICP8-201ENST00000455800 2813 ntBASIC9.89□□□□□ -0.83
SCXQ7RTU7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SCXQ7RTU7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SCXQ7RTU7 AC090114.2-201ENST00000608477 7054 ntBASIC9.88□□□□□ -0.83
SCXQ7RTU7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SCXQ7RTU7 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms