Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AL136172.1-201ENST00000598590 1394 ntBASIC15.12■□□□□ 0.01
CASC4Q6P4E1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.12■□□□□ 0.01
CASC4Q6P4E1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AJ011932.1-201ENST00000621707 465 ntBASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AC005252.2-201ENST00000624630 1141 ntBASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.12■□□□□ 0.01
CASC4Q6P4E1 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 AC010327.5-201ENST00000586923 3061 ntBASIC15.11■□□□□ 0.01
CASC4Q6P4E1 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms