Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 GCSHP3-201ENST00000431120 391 ntBASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 AC011247.3-201ENST00000603297 438 ntBASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 AC006158.1-201ENST00000610661 249 ntBASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AC026410.1-201ENST00000507366 1101 ntBASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AC140658.4-201ENST00000561990 352 ntBASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 RN7SL357P-201ENST00000581065 298 ntBASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 AC006372.4-201ENST00000624122 1543 ntBASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD4Q5XG99 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms