Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
CKS1BP61024 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CKS1BP61024 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CKS1BP61024 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.46□□□□□ -0.73
CKS1BP61024 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.46□□□□□ -0.73
CKS1BP61024 IGHV3-62-201ENST00000520057 340 ntBASIC10.46□□□□□ -0.73
CKS1BP61024 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.46□□□□□ -0.73
CKS1BP61024 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.46□□□□□ -0.73
CKS1BP61024 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.46□□□□□ -0.73
CKS1BP61024 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.46□□□□□ -0.73
CKS1BP61024 PDPK2P-202ENST00000562415 1191 ntBASIC10.46□□□□□ -0.73
CKS1BP61024 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.46□□□□□ -0.73
CKS1BP61024 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.46□□□□□ -0.73
CKS1BP61024 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS1BP61024 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.46□□□□□ -0.73
CKS1BP61024 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.46□□□□□ -0.74
CKS1BP61024 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 CYP4F24P-201ENST00000586049 1580 ntBASIC10.46□□□□□ -0.74
CKS1BP61024 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CKS1BP61024 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.46□□□□□ -0.74
CKS1BP61024 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 AC011474.4-201ENST00000623523 2076 ntBASIC10.46□□□□□ -0.74
CKS1BP61024 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC10.46□□□□□ -0.74
CKS1BP61024 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC10.46□□□□□ -0.74
CKS1BP61024 AC026797.1-201ENST00000624837 2869 ntBASIC10.46□□□□□ -0.74
CKS1BP61024 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.46□□□□□ -0.74
CKS1BP61024 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 AL512791.2-201ENST00000615251 4609 ntBASIC10.46□□□□□ -0.74
CKS1BP61024 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC10.46□□□□□ -0.74
CKS1BP61024 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CKS1BP61024 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 AL136982.4-201ENST00000437689 1740 ntBASIC10.45□□□□□ -0.74
CKS1BP61024 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 AC104109.2-201ENST00000602919 1418 ntBASIC10.45□□□□□ -0.74
CKS1BP61024 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CKS1BP61024 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 FAM220BP-201ENST00000377689 816 ntBASIC10.45□□□□□ -0.74
CKS1BP61024 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 FAM8A3P-201ENST00000427218 844 ntBASIC10.45□□□□□ -0.74
CKS1BP61024 AL671277.1-201ENST00000429656 993 ntBASIC10.45□□□□□ -0.74
CKS1BP61024 AC007967.2-201ENST00000432613 625 ntBASIC10.45□□□□□ -0.74
CKS1BP61024 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS1BP61024 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CKS1BP61024 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.45□□□□□ -0.74
CKS1BP61024 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS1BP61024 AL135744.1-201ENST00000565098 629 ntBASIC10.45□□□□□ -0.74
CKS1BP61024 AP002472.1-201ENST00000577490 586 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms