Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC42P60953 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 HLA-V-204ENST00000476601 1289 ntBASIC13.55□□□□□ -0.24
CDC42P60953 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.55□□□□□ -0.24
CDC42P60953 POLD2P1-201ENST00000511220 997 ntBASIC13.55□□□□□ -0.24
CDC42P60953 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDC42P60953 AP000344.2-201ENST00000512987 629 ntBASIC13.55□□□□□ -0.24
CDC42P60953 AC010336.2-201ENST00000564226 506 ntBASIC13.55□□□□□ -0.24
CDC42P60953 AC005829.1-201ENST00000570002 483 ntBASIC13.55□□□□□ -0.24
CDC42P60953 AC004835.2-201ENST00000603762 682 ntBASIC13.55□□□□□ -0.24
CDC42P60953 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 AP001059.3-201ENST00000619053 235 ntBASIC13.55□□□□□ -0.24
CDC42P60953 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.55□□□□□ -0.24
CDC42P60953 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.55□□□□□ -0.24
CDC42P60953 AC090643.2-201ENST00000623442 2029 ntBASIC13.55□□□□□ -0.24
CDC42P60953 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CDC42P60953 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC42P60953 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDC42P60953 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC42P60953 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CDC42P60953 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC42P60953 NUS1P3-201ENST00000423502 862 ntBASIC13.54□□□□□ -0.24
CDC42P60953 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC42P60953 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC42P60953 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC42P60953 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
CDC42P60953 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.54□□□□□ -0.24
CDC42P60953 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CDC42P60953 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC42P60953 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC42P60953 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42P60953 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42P60953 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC42P60953 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42P60953 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CDC42P60953 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms