Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC141586.1-203ENST00000567242 366 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 AC087392.5-201ENST00000612517 489 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 AC023024.2-201ENST00000623561 1993 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 MROH4P-201ENST00000431302 1578 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HCFC1P51610 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.74□□□□□ -0.37
HCFC1P51610 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HCFC1P51610 AC073869.2-201ENST00000417338 1026 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.74□□□□□ -0.37
HCFC1P51610 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 C2orf69P1-201ENST00000563532 1093 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.74□□□□□ -0.37
HCFC1P51610 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.74□□□□□ -0.37
HCFC1P51610 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 MARK2P16-201ENST00000605714 1723 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 LINC01783-202ENST00000614408 828 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 BX284668.2-205ENST00000619677 828 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.74□□□□□ -0.37
HCFC1P51610 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HCFC1P51610 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HCFC1P51610 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HCFC1P51610 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.74□□□□□ -0.37
HCFC1P51610 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 AC007292.2-201ENST00000593524 1812 ntBASIC12.73□□□□□ -0.37
HCFC1P51610 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HCFC1P51610 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HCFC1P51610 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.73□□□□□ -0.37
HCFC1P51610 MIR1227-201ENST00000408484 88 ntBASIC12.73□□□□□ -0.37
HCFC1P51610 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.73□□□□□ -0.37
HCFC1P51610 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.73□□□□□ -0.37
HCFC1P51610 AC004837.1-201ENST00000446267 564 ntBASIC12.73□□□□□ -0.37
HCFC1P51610 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
HCFC1P51610 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.73□□□□□ -0.37
HCFC1P51610 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.73□□□□□ -0.37
HCFC1P51610 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HCFC1P51610 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms