Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6BP35913 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.93■□□□□ 0.46
PDE6BP35913 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 AL365203.3-201ENST00000609742 2057 ntBASIC17.93■□□□□ 0.46
PDE6BP35913 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 KHSRPP1-201ENST00000427983 1768 ntBASIC17.93■□□□□ 0.46
PDE6BP35913 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PDE6BP35913 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PDE6BP35913 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PDE6BP35913 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.93■□□□□ 0.46
PDE6BP35913 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6BP35913 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.93■□□□□ 0.46
PDE6BP35913 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PDE6BP35913 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6BP35913 AC006504.5-208ENST00000588784 2401 ntBASIC17.92■□□□□ 0.46
PDE6BP35913 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.92■□□□□ 0.46
PDE6BP35913 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
PDE6BP35913 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 GNG10P1-201ENST00000452289 199 ntBASIC17.92■□□□□ 0.46
PDE6BP35913 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 FAM86KP-201ENST00000509817 987 ntBASIC17.92■□□□□ 0.46
PDE6BP35913 RNA5SP406-201ENST00000516106 112 ntBASIC17.92■□□□□ 0.46
PDE6BP35913 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.92■□□□□ 0.46
PDE6BP35913 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.92■□□□□ 0.46
PDE6BP35913 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.92■□□□□ 0.46
PDE6BP35913 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6BP35913 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6BP35913 LINC00244-201ENST00000625073 613 ntBASIC17.92■□□□□ 0.46
PDE6BP35913 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDE6BP35913 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDE6BP35913 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.92■□□□□ 0.46
PDE6BP35913 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6BP35913 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PDE6BP35913 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6BP35913 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6BP35913 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6BP35913 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PDE6BP35913 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.91■□□□□ 0.46
PDE6BP35913 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6BP35913 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDE6BP35913 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.91■□□□□ 0.46
PDE6BP35913 DDX39AP1-201ENST00000445147 1181 ntBASIC17.91■□□□□ 0.46
PDE6BP35913 SCARNA12-201ENST00000459155 270 ntBASIC17.91■□□□□ 0.46
PDE6BP35913 RN7SL494P-201ENST00000461517 304 ntBASIC17.91■□□□□ 0.46
PDE6BP35913 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PDE6BP35913 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.91■□□□□ 0.46
PDE6BP35913 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.91■□□□□ 0.46
PDE6BP35913 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.91■□□□□ 0.46
PDE6BP35913 AP003392.6-201ENST00000607709 325 ntBASIC17.91■□□□□ 0.46
PDE6BP35913 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6BP35913 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms