Protein–RNA interactions for Protein: P05014

IFNA4, Interferon alpha-4, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA4P05014 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.3□□□□□ -0.44
IFNA4P05014 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
IFNA4P05014 AC018529.2-202ENST00000611482 3087 ntBASIC12.3□□□□□ -0.44
IFNA4P05014 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.3□□□□□ -0.44
IFNA4P05014 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
IFNA4P05014 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
IFNA4P05014 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA4P05014 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
IFNA4P05014 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 AC073548.1-201ENST00000624088 1882 ntBASIC12.29□□□□□ -0.44
IFNA4P05014 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.29□□□□□ -0.44
IFNA4P05014 AC005237.2-201ENST00000434368 219 ntBASIC12.29□□□□□ -0.44
IFNA4P05014 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.29□□□□□ -0.44
IFNA4P05014 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.29□□□□□ -0.44
IFNA4P05014 SNHG9-202ENST00000564014 471 ntBASIC12.29□□□□□ -0.44
IFNA4P05014 AC005829.1-201ENST00000570002 483 ntBASIC12.29□□□□□ -0.44
IFNA4P05014 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 AC018529.1-201ENST00000613063 361 ntBASIC12.29□□□□□ -0.44
IFNA4P05014 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
IFNA4P05014 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
IFNA4P05014 OR2I1P-208ENST00000641137 4948 ntBASIC12.29□□□□□ -0.44
IFNA4P05014 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA4P05014 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
IFNA4P05014 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
IFNA4P05014 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
IFNA4P05014 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA4P05014 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.28□□□□□ -0.44
IFNA4P05014 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA4P05014 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 AC097359.2-201ENST00000604992 2389 ntBASIC12.28□□□□□ -0.44
IFNA4P05014 AC004899.2-201ENST00000622993 3860 ntBASIC12.28□□□□□ -0.44
IFNA4P05014 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA4P05014 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA4P05014 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA4P05014 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms