Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 SPDYE14P-201ENST00000442619 822 ntBASIC12.55□□□□□ -0.4
CD3DP04234 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.55□□□□□ -0.4
CD3DP04234 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
CD3DP04234 GAPDHP40-201ENST00000505218 1006 ntBASIC12.55□□□□□ -0.4
CD3DP04234 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.55□□□□□ -0.4
CD3DP04234 AC022145.2-201ENST00000598203 171 ntBASIC12.55□□□□□ -0.4
CD3DP04234 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.55□□□□□ -0.4
CD3DP04234 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CD3DP04234 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 CR383656.2-201ENST00000548656 2254 ntBASIC12.55□□□□□ -0.4
CD3DP04234 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.55□□□□□ -0.4
CD3DP04234 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CD3DP04234 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CD3DP04234 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.55□□□□□ -0.4
CD3DP04234 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CD3DP04234 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD3DP04234 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CD3DP04234 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 MCCD1P2-201ENST00000423228 335 ntBASIC12.54□□□□□ -0.4
CD3DP04234 GPS2P2-201ENST00000430745 888 ntBASIC12.54□□□□□ -0.4
CD3DP04234 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.54□□□□□ -0.4
CD3DP04234 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.54□□□□□ -0.4
CD3DP04234 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.54□□□□□ -0.4
CD3DP04234 C20orf181-201ENST00000623918 480 ntBASIC12.54□□□□□ -0.4
CD3DP04234 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.54□□□□□ -0.4
CD3DP04234 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 KRT8P35-201ENST00000483942 1338 ntBASIC12.54□□□□□ -0.4
CD3DP04234 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.54□□□□□ -0.4
CD3DP04234 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 AL136172.1-201ENST00000598590 1394 ntBASIC12.54□□□□□ -0.4
CD3DP04234 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.54□□□□□ -0.4
CD3DP04234 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CD3DP04234 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD3DP04234 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD3DP04234 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD3DP04234 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD3DP04234 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD3DP04234 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD3DP04234 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD3DP04234 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms