Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CHRNA1P02708 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.87■□□□□ 0.13
CHRNA1P02708 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHRNA1P02708 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.87■□□□□ 0.13
CHRNA1P02708 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.87■□□□□ 0.13
CHRNA1P02708 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.87■□□□□ 0.13
CHRNA1P02708 AC092580.1-201ENST00000433998 658 ntBASIC15.87■□□□□ 0.13
CHRNA1P02708 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 RPL18AP3-201ENST00000462885 528 ntBASIC15.87■□□□□ 0.13
CHRNA1P02708 RN7SL277P-201ENST00000481521 288 ntBASIC15.87■□□□□ 0.13
CHRNA1P02708 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.87■□□□□ 0.13
CHRNA1P02708 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.87■□□□□ 0.13
CHRNA1P02708 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.87■□□□□ 0.13
CHRNA1P02708 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.87■□□□□ 0.13
CHRNA1P02708 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.87■□□□□ 0.13
CHRNA1P02708 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHRNA1P02708 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.86■□□□□ 0.13
CHRNA1P02708 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CHRNA1P02708 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.86■□□□□ 0.13
CHRNA1P02708 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 RN7SL81P-201ENST00000493781 261 ntBASIC15.86■□□□□ 0.13
CHRNA1P02708 ORAOV1P1-201ENST00000503108 395 ntBASIC15.86■□□□□ 0.13
CHRNA1P02708 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.86■□□□□ 0.13
CHRNA1P02708 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.86■□□□□ 0.13
CHRNA1P02708 KRT8P1-201ENST00000557533 1207 ntBASIC15.86■□□□□ 0.13
CHRNA1P02708 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.86■□□□□ 0.13
CHRNA1P02708 AC087392.5-201ENST00000612517 489 ntBASIC15.86■□□□□ 0.13
CHRNA1P02708 AC018529.2-202ENST00000611482 3087 ntBASIC15.86■□□□□ 0.13
CHRNA1P02708 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CHRNA1P02708 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CHRNA1P02708 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 TSPY26P-202ENST00000565928 3884 ntBASIC15.86■□□□□ 0.13
CHRNA1P02708 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHRNA1P02708 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHRNA1P02708 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CHRNA1P02708 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CHRNA1P02708 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CHRNA1P02708 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms