Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 AC004461.2-201ENST00000629517 803 ntBASIC13.17□□□□□ -0.3
ALX3O95076 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ALX3O95076 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.17□□□□□ -0.3
ALX3O95076 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.17□□□□□ -0.3
ALX3O95076 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ALX3O95076 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ALX3O95076 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
ALX3O95076 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ALX3O95076 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ALX3O95076 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.17□□□□□ -0.3
ALX3O95076 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.17□□□□□ -0.3
ALX3O95076 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ALX3O95076 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.16□□□□□ -0.3
ALX3O95076 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 AC073548.1-201ENST00000624088 1882 ntBASIC13.16□□□□□ -0.3
ALX3O95076 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 TUBB3P1-201ENST00000405796 1332 ntBASIC13.16□□□□□ -0.3
ALX3O95076 PCDHB18P-202ENST00000526308 3197 ntBASIC13.16□□□□□ -0.3
ALX3O95076 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ALX3O95076 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.16□□□□□ -0.3
ALX3O95076 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.16□□□□□ -0.3
ALX3O95076 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 AL645937.2-201ENST00000396808 931 ntBASIC13.16□□□□□ -0.3
ALX3O95076 TSEN15P1-201ENST00000423257 515 ntBASIC13.16□□□□□ -0.3
ALX3O95076 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.16□□□□□ -0.3
ALX3O95076 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.16□□□□□ -0.3
ALX3O95076 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
ALX3O95076 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
ALX3O95076 AL109936.8-201ENST00000641772 604 ntBASIC13.16□□□□□ -0.3
ALX3O95076 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
ALX3O95076 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ALX3O95076 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.16□□□□□ -0.3
ALX3O95076 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ALX3O95076 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ALX3O95076 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
ALX3O95076 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms