Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC18O15417 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC18O15417 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TNRC18O15417 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.24■□□□□ 0.03
TNRC18O15417 FPGT-205ENST00000482102 561 ntTSL 4 BASIC15.24■□□□□ 0.03
TNRC18O15417 AC103810.4-201ENST00000578601 257 ntBASIC15.24■□□□□ 0.03
TNRC18O15417 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC15.24■□□□□ 0.03
TNRC18O15417 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TNRC18O15417 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 KRT18P40-201ENST00000599859 1571 ntBASIC15.24■□□□□ 0.03
TNRC18O15417 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TNRC18O15417 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC15.24■□□□□ 0.03
TNRC18O15417 RNF165-205ENST00000588679 2904 ntBASIC15.24■□□□□ 0.03
TNRC18O15417 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TNRC18O15417 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.24■□□□□ 0.03
TNRC18O15417 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC18O15417 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.24■□□□□ 0.03
TNRC18O15417 MIR4726-201ENST00000615971 58 ntBASIC15.24■□□□□ 0.03
TNRC18O15417 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC15.24■□□□□ 0.03
TNRC18O15417 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC18O15417 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
TNRC18O15417 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC15.23■□□□□ 0.03
TNRC18O15417 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.23■□□□□ 0.03
TNRC18O15417 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TNRC18O15417 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNRC18O15417 AC020893.2-201ENST00000506083 723 ntBASIC15.23■□□□□ 0.03
TNRC18O15417 FP325317.1-201ENST00000539936 1042 ntBASIC15.23■□□□□ 0.03
TNRC18O15417 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC15.23■□□□□ 0.03
TNRC18O15417 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.23■□□□□ 0.03
TNRC18O15417 LINC02447-202ENST00000501888 2146 ntBASIC15.23■□□□□ 0.03
TNRC18O15417 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 SALL4P6-201ENST00000429385 1691 ntBASIC15.23■□□□□ 0.03
TNRC18O15417 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 HLA-DRB9-201ENST00000449413 343 ntBASIC15.23■□□□□ 0.03
TNRC18O15417 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TNRC18O15417 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC15.23■□□□□ 0.03
TNRC18O15417 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TNRC18O15417 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNRC18O15417 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.22■□□□□ 0.03
TNRC18O15417 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 HMGN1P4-201ENST00000419500 290 ntBASIC15.22■□□□□ 0.03
TNRC18O15417 RN7SL638P-201ENST00000494527 290 ntBASIC15.22■□□□□ 0.03
TNRC18O15417 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC15.22■□□□□ 0.03
TNRC18O15417 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC15.22■□□□□ 0.03
TNRC18O15417 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
TNRC18O15417 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TNRC18O15417 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.22■□□□□ 0.03
TNRC18O15417 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC15.22■□□□□ 0.03
TNRC18O15417 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.22■□□□□ 0.03
TNRC18O15417 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.22■□□□□ 0.03
TNRC18O15417 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
TNRC18O15417 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TNRC18O15417 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNRC18O15417 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TNRC18O15417 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms