Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KRT17P6-201ENST00000453795 1220 ntBASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC104819.1-201ENST00000504587 486 ntBASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RN7SL832P-201ENST00000607781 1756 ntBASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC104758.3-203ENST00000562938 2123 ntBASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NSUN5P1-202ENST00000421140 1535 ntBASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NSUN5P2-203ENST00000457352 1529 ntBASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AL357054.4-201ENST00000606285 2814 ntBASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TP73-AS1-210ENST00000637775 1455 ntBASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AP002383.4-201ENST00000442518 975 ntBASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC093724.1-201ENST00000448659 1027 ntBASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KRT18P35-201ENST00000510488 1269 ntBASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MIR4321-201ENST00000592276 80 ntBASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AL358472.4-201ENST00000633140 710 ntBASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PES1-203ENST00000402281 2760 ntTSL 2 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms