Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
NACAE9PAV3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
NACAE9PAV3 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
NACAE9PAV3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
NACAE9PAV3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.92□□□□□ -0.66
NACAE9PAV3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.92□□□□□ -0.66
NACAE9PAV3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NACAE9PAV3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NACAE9PAV3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 HLA-K-203ENST00000430151 1046 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 GPR53P-205ENST00000457298 1084 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
NACAE9PAV3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC10.91□□□□□ -0.66
NACAE9PAV3 WFDC1-204ENST00000613603 549 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC023090.2-201ENST00000625182 2110 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC012508.2-201ENST00000567613 1472 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NACAE9PAV3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC098614.1-201ENST00000368528 745 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.91□□□□□ -0.66
NACAE9PAV3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.91□□□□□ -0.66
NACAE9PAV3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC10.91□□□□□ -0.66
NACAE9PAV3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.91□□□□□ -0.66
NACAE9PAV3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.91□□□□□ -0.66
NACAE9PAV3 CTBP2P3-201ENST00000585629 1255 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 MIR6752-201ENST00000618442 71 ntBASIC10.91□□□□□ -0.66
NACAE9PAV3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NACAE9PAV3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.91□□□□□ -0.66
NACAE9PAV3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NACAE9PAV3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
NACAE9PAV3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms