Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HFM1A2PYH4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC21.39■■□□□ 1.01
HFM1A2PYH4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC21.39■■□□□ 1.01
HFM1A2PYH4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
HFM1A2PYH4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 MIR645-201ENST00000385283 94 ntBASIC21.38■■□□□ 1.01
HFM1A2PYH4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 AC026320.2-201ENST00000434379 478 ntBASIC21.38■■□□□ 1.01
HFM1A2PYH4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 EEF1DP6-201ENST00000449232 372 ntBASIC21.38■■□□□ 1.01
HFM1A2PYH4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 YRDCP1-201ENST00000621419 643 ntBASIC21.38■■□□□ 1.01
HFM1A2PYH4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 USP17L6P-201ENST00000382470 1197 ntBASIC21.38■■□□□ 1.01
HFM1A2PYH4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 RPL8P2-201ENST00000430538 502 ntBASIC21.38■■□□□ 1.01
HFM1A2PYH4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 AP000358.1-201ENST00000456260 156 ntBASIC21.38■■□□□ 1.01
HFM1A2PYH4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.38■■□□□ 1.01
HFM1A2PYH4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HFM1A2PYH4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 AC007952.5-201ENST00000572818 1486 ntBASIC21.37■■□□□ 1.01
HFM1A2PYH4 LINC00115-201ENST00000473798 1317 ntBASIC21.37■■□□□ 1.01
HFM1A2PYH4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 FTH1P22-201ENST00000456305 520 ntBASIC21.37■■□□□ 1.01
HFM1A2PYH4 AC008723.1-201ENST00000506922 207 ntBASIC21.37■■□□□ 1.01
HFM1A2PYH4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC21.37■■□□□ 1.01
HFM1A2PYH4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HFM1A2PYH4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HFM1A2PYH4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HFM1A2PYH4 KRT17P5-201ENST00000332088 839 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms