Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 AC139749.1-202ENST00000617529 3139 ntBASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 SHC1P1-201ENST00000425230 1745 ntBASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 HIST2H2BB-201ENST00000449108 381 ntBASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 AC244157.2-201ENST00000616239 1006 ntBASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 AC027601.3-201ENST00000622907 509 ntBASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HDGFL3Q9Y3E1 KHSRPP1-201ENST00000427983 1768 ntBASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDGFL3Q9Y3E1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 EEF1DP1-201ENST00000585891 896 ntBASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AC010328.2-201ENST00000597698 1111 ntBASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 AC009093.10-201ENST00000641956 1442 ntBASIC13.27□□□□□ -0.29
HDGFL3Q9Y3E1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms