Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 ENPP7P8-202ENST00000527856 1345 ntBASIC16.93■□□□□ 0.3
CDCA5Q96FF9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA5Q96FF9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AL391005.1-201ENST00000623953 2435 ntBASIC16.92■□□□□ 0.3
CDCA5Q96FF9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AC015688.4-201ENST00000580780 1647 ntBASIC16.92■□□□□ 0.3
CDCA5Q96FF9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AC011270.2-201ENST00000624293 2550 ntBASIC16.92■□□□□ 0.3
CDCA5Q96FF9 LINC00528-201ENST00000600723 2160 ntBASIC16.92■□□□□ 0.3
CDCA5Q96FF9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 RN7SL375P-201ENST00000492442 298 ntBASIC16.92■□□□□ 0.3
CDCA5Q96FF9 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 VENTXP3-201ENST00000546480 773 ntBASIC16.92■□□□□ 0.3
CDCA5Q96FF9 NAV1-210ENST00000593583 726 ntBASIC16.92■□□□□ 0.3
CDCA5Q96FF9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA5Q96FF9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.91■□□□□ 0.3
CDCA5Q96FF9 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 AC068831.5-201ENST00000557387 328 ntBASIC16.91■□□□□ 0.3
CDCA5Q96FF9 AC145285.5-201ENST00000562217 361 ntBASIC16.91■□□□□ 0.3
CDCA5Q96FF9 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 SNORD3B-1-201ENST00000577988 758 ntBASIC16.91■□□□□ 0.3
CDCA5Q96FF9 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CDCA5Q96FF9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms