Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM11Q96F44 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM11Q96F44 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 RNA5SP486-201ENST00000515961 83 ntBASIC15.62■□□□□ 0.09
TRIM11Q96F44 SORD2P-201ENST00000558556 1069 ntBASIC15.62■□□□□ 0.09
TRIM11Q96F44 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 AC106820.3-201ENST00000561653 397 ntBASIC15.62■□□□□ 0.09
TRIM11Q96F44 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM11Q96F44 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM11Q96F44 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.61■□□□□ 0.09
TRIM11Q96F44 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM11Q96F44 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 GNRHR2-203ENST00000581100 1187 ntBASIC15.61■□□□□ 0.09
TRIM11Q96F44 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM11Q96F44 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms