Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AL035456.1-201ENST00000456064 1369 ntBASIC11.32□□□□□ -0.6
SMIM12Q96EX1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AC026120.1-201ENST00000611536 926 ntBASIC11.32□□□□□ -0.6
SMIM12Q96EX1 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM12Q96EX1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 AC114271.1-201ENST00000612689 2813 ntBASIC11.31□□□□□ -0.6
SMIM12Q96EX1 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 ADH5P3-201ENST00000433842 1137 ntBASIC11.31□□□□□ -0.6
SMIM12Q96EX1 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 AC000095.1-201ENST00000603208 874 ntBASIC11.31□□□□□ -0.6
SMIM12Q96EX1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.31□□□□□ -0.6
SMIM12Q96EX1 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM12Q96EX1 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms