Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 TOMM22P5-201ENST00000416399 439 ntBASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC067863.1-201ENST00000494933 530 ntBASIC12.87□□□□□ -0.35
CCDC107Q8WV48 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AP001160.2-201ENST00000596071 487 ntBASIC12.87□□□□□ -0.35
CCDC107Q8WV48 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC100757.3-201ENST00000622361 1406 ntBASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC016397.2-201ENST00000624848 1985 ntBASIC12.87□□□□□ -0.35
CCDC107Q8WV48 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.87□□□□□ -0.35
CCDC107Q8WV48 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AC015909.5-201ENST00000624336 2266 ntBASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 PTPRVP-205ENST00000641549 5067 ntBASIC12.86□□□□□ -0.35
CCDC107Q8WV48 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.86□□□□□ -0.35
CCDC107Q8WV48 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AL590560.3-201ENST00000623350 461 ntBASIC12.86□□□□□ -0.35
CCDC107Q8WV48 AC004461.2-201ENST00000629517 803 ntBASIC12.86□□□□□ -0.35
CCDC107Q8WV48 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CCDC107Q8WV48 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms