Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC103988.2-201ENST00000561804 725 ntBASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AC103810.3-201ENST00000583567 96 ntBASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AC139712.1-201ENST00000378256 1875 ntBASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 SHC1P1-201ENST00000425230 1745 ntBASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 AC020907.1-201ENST00000616460 1350 ntBASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 AL691447.1-201ENST00000419456 387 ntBASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 RPL13AP20-201ENST00000459725 609 ntBASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCUBE3Q8IX30 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 RN7SL560P-201ENST00000577943 264 ntBASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 EEF1DP1-201ENST00000585891 896 ntBASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms