Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 AC006122.1-201ENST00000493323 440 ntBASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 AJ011931.1-201ENST00000618749 2492 ntBASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
OTOP1Q7RTM1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 KRT8P31-201ENST00000504812 1408 ntBASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 RN7SKP230-201ENST00000365642 335 ntBASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TSPY25P-201ENST00000429463 745 ntBASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 MRPL37P1-201ENST00000592451 1337 ntBASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 AC144522.1-201ENST00000625111 1658 ntBASIC16.91■□□□□ 0.3
OTOP1Q7RTM1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 COX20P1-201ENST00000366529 357 ntBASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 MIR3188-201ENST00000583494 85 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms