Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDK3Q00526 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDK3Q00526 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 CYP46A4P-201ENST00000414953 267 ntBASIC14.46□□□□□ -0.09
CDK3Q00526 AC078875.1-201ENST00000431907 724 ntBASIC14.46□□□□□ -0.09
CDK3Q00526 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.46□□□□□ -0.09
CDK3Q00526 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.46□□□□□ -0.09
CDK3Q00526 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDK3Q00526 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDK3Q00526 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.46□□□□□ -0.09
CDK3Q00526 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK3Q00526 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK3Q00526 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.46□□□□□ -0.1
CDK3Q00526 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK3Q00526 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDK3Q00526 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK3Q00526 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDK3Q00526 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDK3Q00526 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.45□□□□□ -0.1
CDK3Q00526 MIR769-201ENST00000390225 118 ntBASIC14.45□□□□□ -0.1
CDK3Q00526 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.45□□□□□ -0.1
CDK3Q00526 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.45□□□□□ -0.1
CDK3Q00526 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.45□□□□□ -0.1
CDK3Q00526 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.45□□□□□ -0.1
CDK3Q00526 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.45□□□□□ -0.1
CDK3Q00526 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.45□□□□□ -0.1
CDK3Q00526 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.45□□□□□ -0.1
CDK3Q00526 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.45□□□□□ -0.1
CDK3Q00526 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.45□□□□□ -0.1
CDK3Q00526 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.45□□□□□ -0.1
CDK3Q00526 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.45□□□□□ -0.1
CDK3Q00526 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.45□□□□□ -0.1
CDK3Q00526 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.45□□□□□ -0.1
CDK3Q00526 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDK3Q00526 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.45□□□□□ -0.1
CDK3Q00526 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDK3Q00526 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 AGGF1P1-201ENST00000509500 2073 ntBASIC14.45□□□□□ -0.1
CDK3Q00526 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDK3Q00526 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.45□□□□□ -0.1
CDK3Q00526 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.44□□□□□ -0.1
CDK3Q00526 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.44□□□□□ -0.1
CDK3Q00526 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDK3Q00526 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.44□□□□□ -0.1
CDK3Q00526 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.44□□□□□ -0.1
CDK3Q00526 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.44□□□□□ -0.1
CDK3Q00526 RN7SKP214-201ENST00000364208 315 ntBASIC14.44□□□□□ -0.1
CDK3Q00526 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CDK3Q00526 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDK3Q00526 IGHJ2P-201ENST00000454480 60 ntBASIC14.44□□□□□ -0.1
CDK3Q00526 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.44□□□□□ -0.1
CDK3Q00526 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms