Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHB4P54760 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
EPHB4P54760 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.64■□□□□ 0.26
EPHB4P54760 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHB4P54760 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.64■□□□□ 0.25
EPHB4P54760 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHB4P54760 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 AC026316.1-201ENST00000398900 414 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 NOC2LP1-201ENST00000450578 752 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.64■□□□□ 0.25
EPHB4P54760 AC125604.1-201ENST00000496255 707 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 MARK2P5-201ENST00000507649 634 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.64■□□□□ 0.25
EPHB4P54760 RN7SL163P-201ENST00000583100 276 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 AC068587.8-201ENST00000641239 219 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 AL805961.1-201ENST00000642026 753 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 AL157791.1-201ENST00000553667 1699 ntBASIC16.64■□□□□ 0.25
EPHB4P54760 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
EPHB4P54760 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
EPHB4P54760 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHB4P54760 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB4P54760 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB4P54760 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHB4P54760 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHB4P54760 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
EPHB4P54760 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
EPHB4P54760 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EPHB4P54760 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.63■□□□□ 0.25
EPHB4P54760 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHB4P54760 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB4P54760 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EPHB4P54760 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHB4P54760 AL158070.2-201ENST00000623713 1621 ntBASIC16.63■□□□□ 0.25
EPHB4P54760 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB4P54760 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 KRT8P14-201ENST00000414254 1442 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
EPHB4P54760 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms