Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN4P51793 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
CLCN4P51793 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CLCN4P51793 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 AL590440.2-201ENST00000641973 1595 ntBASIC15.43■□□□□ 0.06
CLCN4P51793 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN4P51793 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 FLJ16779-201ENST00000612722 7638 ntBASIC15.43■□□□□ 0.06
CLCN4P51793 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN4P51793 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN4P51793 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CLCN4P51793 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CLCN4P51793 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN4P51793 KRT8P31-201ENST00000504812 1408 ntBASIC15.43■□□□□ 0.06
CLCN4P51793 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN4P51793 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN4P51793 LINC01101-201ENST00000622953 1884 ntBASIC15.42■□□□□ 0.06
CLCN4P51793 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCN4P51793 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 KRT8P28-201ENST00000433288 1390 ntBASIC15.42■□□□□ 0.06
CLCN4P51793 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN4P51793 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 AL807761.2-201ENST00000422849 729 ntBASIC15.42■□□□□ 0.06
CLCN4P51793 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN4P51793 AL627422.1-201ENST00000434104 580 ntBASIC15.42■□□□□ 0.06
CLCN4P51793 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCN4P51793 OR2R1P-201ENST00000441404 914 ntBASIC15.42■□□□□ 0.06
CLCN4P51793 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 CHCHD2P9-201ENST00000461726 456 ntBASIC15.42■□□□□ 0.06
CLCN4P51793 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.42■□□□□ 0.06
CLCN4P51793 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCN4P51793 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN4P51793 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCN4P51793 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN4P51793 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLCN4P51793 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN4P51793 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN4P51793 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN4P51793 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
CLCN4P51793 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN4P51793 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.41■□□□□ 0.06
CLCN4P51793 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.41■□□□□ 0.06
CLCN4P51793 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.41■□□□□ 0.06
CLCN4P51793 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN4P51793 CTBP2P4-201ENST00000513884 920 ntBASIC15.41■□□□□ 0.06
CLCN4P51793 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.41■□□□□ 0.06
CLCN4P51793 AC007326.1-201ENST00000604539 458 ntBASIC15.41■□□□□ 0.06
CLCN4P51793 AC009560.1-201ENST00000620208 434 ntBASIC15.41■□□□□ 0.06
CLCN4P51793 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.41■□□□□ 0.06
CLCN4P51793 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN4P51793 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCN4P51793 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN4P51793 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN4P51793 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN4P51793 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms