Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP13P45452 AC145423.3-201ENST00000615987 467 ntBASIC15.4■□□□□ 0.06
MMP13P45452 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MMP13P45452 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 KRT8P24-201ENST00000560290 1559 ntBASIC15.4■□□□□ 0.06
MMP13P45452 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 AL354702.1-201ENST00000442006 1960 ntBASIC15.4■□□□□ 0.06
MMP13P45452 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MMP13P45452 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP13P45452 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MMP13P45452 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP13P45452 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
MMP13P45452 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
MMP13P45452 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.39■□□□□ 0.05
MMP13P45452 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 GAPDHP21-201ENST00000450301 1010 ntBASIC15.39■□□□□ 0.05
MMP13P45452 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.39■□□□□ 0.05
MMP13P45452 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.39■□□□□ 0.05
MMP13P45452 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP13P45452 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MMP13P45452 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
MMP13P45452 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
MMP13P45452 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
MMP13P45452 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MMP13P45452 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MMP13P45452 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MMP13P45452 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP13P45452 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP13P45452 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP13P45452 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 BCRP2-202ENST00000447763 634 ntBASIC15.38■□□□□ 0.05
MMP13P45452 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP13P45452 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP13P45452 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.38■□□□□ 0.05
MMP13P45452 BCRP6-201ENST00000510112 632 ntBASIC15.38■□□□□ 0.05
MMP13P45452 BCRP7-201ENST00000511549 544 ntBASIC15.38■□□□□ 0.05
MMP13P45452 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP13P45452 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP13P45452 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP13P45452 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP13P45452 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
MMP13P45452 BTNL10-201ENST00000595971 695 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms