Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
CEACAM3P40198 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.12□□□□□ -0.47
CEACAM3P40198 U91328.1-201ENST00000437528 223 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CEACAM3P40198 AL590640.2-201ENST00000457038 527 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 CROCCP4-201ENST00000457096 498 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.12□□□□□ -0.47
CEACAM3P40198 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.12□□□□□ -0.47
CEACAM3P40198 COX5BP1-201ENST00000507622 393 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.12□□□□□ -0.47
CEACAM3P40198 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.12□□□□□ -0.47
CEACAM3P40198 AC078819.1-201ENST00000547454 765 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 AC012085.1-201ENST00000548270 765 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 OR10B1P-201ENST00000601666 907 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 AC138696.2-201ENST00000607376 223 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 ZACNP1-201ENST00000612259 710 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.12□□□□□ -0.47
CEACAM3P40198 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.12□□□□□ -0.47
CEACAM3P40198 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CEACAM3P40198 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.11□□□□□ -0.47
CEACAM3P40198 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CEACAM3P40198 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.11□□□□□ -0.47
CEACAM3P40198 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 OR8S1-201ENST00000310194 1080 ntBASIC12.11□□□□□ -0.47
CEACAM3P40198 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.11□□□□□ -0.47
CEACAM3P40198 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 MIR1202-201ENST00000408529 83 ntBASIC12.11□□□□□ -0.47
CEACAM3P40198 YBX1P6-201ENST00000442962 1002 ntBASIC12.11□□□□□ -0.47
CEACAM3P40198 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.11□□□□□ -0.47
CEACAM3P40198 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 IGHV3-71-201ENST00000523324 359 ntBASIC12.11□□□□□ -0.47
CEACAM3P40198 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.11□□□□□ -0.47
CEACAM3P40198 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.11□□□□□ -0.47
CEACAM3P40198 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms