Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HOXC6P09630 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.48■□□□□ 0.23
HOXC6P09630 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HOXC6P09630 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC6P09630 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.48■□□□□ 0.23
HOXC6P09630 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 GUSBP10-201ENST00000417412 665 ntBASIC16.48■□□□□ 0.23
HOXC6P09630 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 AL512306.1-201ENST00000432698 848 ntBASIC16.48■□□□□ 0.23
HOXC6P09630 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC6P09630 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.48■□□□□ 0.23
HOXC6P09630 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC6P09630 IL9RP3-201ENST00000442856 1674 ntBASIC16.48■□□□□ 0.23
HOXC6P09630 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC6P09630 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC6P09630 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.48■□□□□ 0.23
HOXC6P09630 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
HOXC6P09630 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 AC023157.3-201ENST00000619086 2088 ntBASIC16.47■□□□□ 0.23
HOXC6P09630 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC6P09630 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC6P09630 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.47■□□□□ 0.23
HOXC6P09630 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HOXC6P09630 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HOXC6P09630 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HOXC6P09630 MIR1227-201ENST00000408484 88 ntBASIC16.47■□□□□ 0.23
HOXC6P09630 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.47■□□□□ 0.23
HOXC6P09630 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HOXC6P09630 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HOXC6P09630 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HOXC6P09630 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC6P09630 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HOXC6P09630 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HOXC6P09630 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HOXC6P09630 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.47■□□□□ 0.23
HOXC6P09630 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC6P09630 AP002353.1-201ENST00000528257 1599 ntBASIC16.47■□□□□ 0.23
HOXC6P09630 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC6P09630 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXC6P09630 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXC6P09630 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXC6P09630 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HOXC6P09630 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC6P09630 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms