Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
SOCS3O14543 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
SOCS3O14543 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.15□□□□□ -0.63
SOCS3O14543 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
SOCS3O14543 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SOCS3O14543 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SOCS3O14543 AC139712.1-201ENST00000378256 1875 ntBASIC11.15□□□□□ -0.63
SOCS3O14543 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SOCS3O14543 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 AC215219.1-201ENST00000400706 1817 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 AC016397.2-201ENST00000624848 1985 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 AC005229.1-201ENST00000392885 409 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.14□□□□□ -0.63
SOCS3O14543 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.14□□□□□ -0.63
SOCS3O14543 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 HMGN1P19-201ENST00000436976 333 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 AL355864.2-201ENST00000447420 863 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 AC007389.4-201ENST00000454674 793 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 RN7SL752P-201ENST00000463779 287 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.14□□□□□ -0.63
SOCS3O14543 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.14□□□□□ -0.63
SOCS3O14543 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.14□□□□□ -0.63
SOCS3O14543 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 AC015936.2-201ENST00000593177 259 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 AC132938.4-201ENST00000623835 848 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 AC025048.6-201ENST00000634326 1161 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 AC117489.1-201ENST00000625169 3217 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 MIR193BHG-211ENST00000641433 5365 ntBASIC11.14□□□□□ -0.63
SOCS3O14543 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SOCS3O14543 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
SOCS3O14543 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SOCS3O14543 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SOCS3O14543 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SOCS3O14543 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SOCS3O14543 AC009093.2-202ENST00000620513 2079 ntBASIC11.13□□□□□ -0.63
SOCS3O14543 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
SOCS3O14543 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.13□□□□□ -0.63
SOCS3O14543 AC020910.6-201ENST00000623084 1459 ntBASIC11.13□□□□□ -0.63
SOCS3O14543 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
SOCS3O14543 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.13□□□□□ -0.63
SOCS3O14543 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.13□□□□□ -0.63
SOCS3O14543 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SOCS3O14543 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.13□□□□□ -0.63
SOCS3O14543 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SOCS3O14543 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SOCS3O14543 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms