Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CD5-201ENST00000347785 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 C2-211ENST00000469372 1906 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 C22orf46-201ENST00000402966 4975 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PTGER4P2-CDK2AP2P2-201ENST00000619442 3123 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF423-205ENST00000562871 4514 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 COX5BP2-201ENST00000392354 334 ntBASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 BRINP2-201ENST00000361539 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SERINC4-202ENST00000319327 2630 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 MPP2-201ENST00000269095 4414 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 HSPA8P9-201ENST00000485881 1943 ntBASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TP53-201ENST00000269305 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TP53-226ENST00000620739 2579 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 TSPAN2-202ENST00000369516 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC7.34□□□□□ -1.23
CDC42SE1Q9NRR8 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms