RNA–Protein interactions for RNA: ENST00000396251.1

XIRP1-202, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene XIRP1, Length 6,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-202ENST00000396251 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
XIRP1-202ENST00000396251 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
XIRP1-202ENST00000396251 FAM9AQ8IZU1 332 aaPredicted RBP19.97■□□□□ 0.79
XIRP1-202ENST00000396251 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
XIRP1-202ENST00000396251 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
XIRP1-202ENST00000396251 APLP2Q06481 763 aa19.39■□□□□ 0.69
XIRP1-202ENST00000396251 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
XIRP1-202ENST00000396251 ATP1B4Q9UN42 357 aaPredicted RBP18.89■□□□□ 0.61
XIRP1-202ENST00000396251 RANGAP1P46060 587 aaPredicted RBP18.77■□□□□ 0.6
XIRP1-202ENST00000396251 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
XIRP1-202ENST00000396251 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
XIRP1-202ENST00000396251 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
XIRP1-202ENST00000396251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
XIRP1-202ENST00000396251 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
XIRP1-202ENST00000396251 ABCC9O60706 1549 aa18.49■□□□□ 0.55
XIRP1-202ENST00000396251 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
XIRP1-202ENST00000396251 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
XIRP1-202ENST00000396251 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
XIRP1-202ENST00000396251 FBLN2P98095 1184 aa18.06■□□□□ 0.48
XIRP1-202ENST00000396251 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
XIRP1-202ENST00000396251 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
XIRP1-202ENST00000396251 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.45
XIRP1-202ENST00000396251 NPM1P06748 294 aaKnown RBP eCLIP17.76■□□□□ 0.43
XIRP1-202ENST00000396251 ITGAEP38570 1179 aa17.76■□□□□ 0.43
XIRP1-202ENST00000396251 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
XIRP1-202ENST00000396251 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
XIRP1-202ENST00000396251 ZEB1P37275 1124 aaPredicted RBP17.67■□□□□ 0.42
XIRP1-202ENST00000396251 POLR3GLQ9BT43 218 aa17.66■□□□□ 0.42
XIRP1-202ENST00000396251 BCANQ96GW7 911 aa17.63■□□□□ 0.41
XIRP1-202ENST00000396251 ERICH6Q7L0X2 663 aa17.63■□□□□ 0.41
XIRP1-202ENST00000396251 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
XIRP1-202ENST00000396251 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
XIRP1-202ENST00000396251 MYT1Q01538 1121 aa17.46■□□□□ 0.39
XIRP1-202ENST00000396251 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
XIRP1-202ENST00000396251 TRIM52Q96A61 297 aa17.46■□□□□ 0.39
XIRP1-202ENST00000396251 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
XIRP1-202ENST00000396251 NEFLP07196 543 aa17.43■□□□□ 0.38
XIRP1-202ENST00000396251 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
XIRP1-202ENST00000396251 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
XIRP1-202ENST00000396251 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
XIRP1-202ENST00000396251 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
XIRP1-202ENST00000396251 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
XIRP1-202ENST00000396251 ARID3CA6NKF2 412 aa17.3■□□□□ 0.36
XIRP1-202ENST00000396251 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
XIRP1-202ENST00000396251 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
XIRP1-202ENST00000396251 CNGB1Q14028 1251 aaPredicted RBP17.24■□□□□ 0.35
XIRP1-202ENST00000396251 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
XIRP1-202ENST00000396251 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
XIRP1-202ENST00000396251 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
XIRP1-202ENST00000396251 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
XIRP1-202ENST00000396251 NEFMP07197 916 aa17.16■□□□□ 0.34
XIRP1-202ENST00000396251 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
XIRP1-202ENST00000396251 ZNF326Q5BKZ1 582 aaKnown RBP17.14■□□□□ 0.33
XIRP1-202ENST00000396251 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
XIRP1-202ENST00000396251 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
XIRP1-202ENST00000396251 HRCP23327 699 aa17.1■□□□□ 0.33
XIRP1-202ENST00000396251 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
XIRP1-202ENST00000396251 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
XIRP1-202ENST00000396251 DAXXQ9UER7 740 aaPredicted RBP17.05■□□□□ 0.32
XIRP1-202ENST00000396251 ARID4BQ4LE39 1312 aaPredicted RBP17.02■□□□□ 0.32
XIRP1-202ENST00000396251 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
XIRP1-202ENST00000396251 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
XIRP1-202ENST00000396251 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
XIRP1-202ENST00000396251 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
XIRP1-202ENST00000396251 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
XIRP1-202ENST00000396251 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
XIRP1-202ENST00000396251 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
XIRP1-202ENST00000396251 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
XIRP1-202ENST00000396251 NACADO15069 1562 aa16.87■□□□□ 0.29
XIRP1-202ENST00000396251 KCNH8Q96L42 1107 aa16.87■□□□□ 0.29
XIRP1-202ENST00000396251 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
XIRP1-202ENST00000396251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.29
XIRP1-202ENST00000396251 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
XIRP1-202ENST00000396251 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
XIRP1-202ENST00000396251 A0A0G2JS52 829 aa16.8■□□□□ 0.28
XIRP1-202ENST00000396251 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.27
XIRP1-202ENST00000396251 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
XIRP1-202ENST00000396251 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
XIRP1-202ENST00000396251 MTUS2Q5JR59 1369 aa16.67■□□□□ 0.26
XIRP1-202ENST00000396251 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
XIRP1-202ENST00000396251 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
XIRP1-202ENST00000396251 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
XIRP1-202ENST00000396251 ANP32CO43423 234 aa16.61■□□□□ 0.25
XIRP1-202ENST00000396251 CHIC2Q9UKJ5 165 aa16.58■□□□□ 0.24
XIRP1-202ENST00000396251 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
XIRP1-202ENST00000396251 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
XIRP1-202ENST00000396251 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
XIRP1-202ENST00000396251 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
XIRP1-202ENST00000396251 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
XIRP1-202ENST00000396251 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
XIRP1-202ENST00000396251 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
XIRP1-202ENST00000396251 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
XIRP1-202ENST00000396251 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
XIRP1-202ENST00000396251 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
XIRP1-202ENST00000396251 MLECQ14165 292 aa16.46■□□□□ 0.23
XIRP1-202ENST00000396251 KIF27Q86VH2 1401 aa16.46■□□□□ 0.22
XIRP1-202ENST00000396251 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
XIRP1-202ENST00000396251 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
XIRP1-202ENST00000396251 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
XIRP1-202ENST00000396251 RTL5Q5HYW3 569 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms