Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.62■□□□□ 0.41
DDX11Q96FC9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 BX640514.1-201ENST00000583223 1918 ntBASIC17.61■□□□□ 0.41
DDX11Q96FC9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 MIR1247-201ENST00000408206 136 ntBASIC17.61■□□□□ 0.41
DDX11Q96FC9 BTBD6P1-201ENST00000412176 1267 ntBASIC17.61■□□□□ 0.41
DDX11Q96FC9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 GOLGA2P4-201ENST00000441462 777 ntBASIC17.61■□□□□ 0.41
DDX11Q96FC9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 MIR4741-201ENST00000579822 90 ntBASIC17.61■□□□□ 0.41
DDX11Q96FC9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.61■□□□□ 0.41
DDX11Q96FC9 AC006453.4-201ENST00000636949 1252 ntBASIC17.61■□□□□ 0.41
DDX11Q96FC9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX11Q96FC9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
DDX11Q96FC9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 TPM3P8-201ENST00000330554 643 ntBASIC17.6■□□□□ 0.41
DDX11Q96FC9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 AC245100.3-201ENST00000441281 285 ntBASIC17.6■□□□□ 0.41
DDX11Q96FC9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 AC026434.2-201ENST00000506094 1078 ntBASIC17.6■□□□□ 0.41
DDX11Q96FC9 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 AL022328.3-201ENST00000607943 679 ntBASIC17.6■□□□□ 0.41
DDX11Q96FC9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 LRRC59-203ENST00000576448 1531 ntBASIC17.6■□□□□ 0.41
DDX11Q96FC9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms