Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.07□□□□□ -0.32
AP3S1Q92572 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.07□□□□□ -0.32
AP3S1Q92572 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.07□□□□□ -0.32
AP3S1Q92572 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.07□□□□□ -0.32
AP3S1Q92572 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.07□□□□□ -0.32
AP3S1Q92572 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.07□□□□□ -0.32
AP3S1Q92572 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 HSPA8P5-201ENST00000456928 2069 ntBASIC13.07□□□□□ -0.32
AP3S1Q92572 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 KRT8P35-201ENST00000483942 1338 ntBASIC13.07□□□□□ -0.32
AP3S1Q92572 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 AGAP10P-201ENST00000454844 2418 ntBASIC13.07□□□□□ -0.32
AP3S1Q92572 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
AP3S1Q92572 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
AP3S1Q92572 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 AL355306.1-201ENST00000415580 579 ntBASIC13.06□□□□□ -0.32
AP3S1Q92572 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.06□□□□□ -0.32
AP3S1Q92572 AC092364.2-202ENST00000597012 1073 ntBASIC13.06□□□□□ -0.32
AP3S1Q92572 NCLP1-201ENST00000445357 1963 ntBASIC13.06□□□□□ -0.32
AP3S1Q92572 AP002761.4-201ENST00000565433 3361 ntBASIC13.06□□□□□ -0.32
AP3S1Q92572 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 KHSRPP1-201ENST00000427983 1768 ntBASIC13.06□□□□□ -0.32
AP3S1Q92572 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 AP3S2-216ENST00000617003 1561 ntBASIC13.06□□□□□ -0.32
AP3S1Q92572 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms