Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC215219.1-201ENST00000400706 1817 ntBASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 SUPT20HL1-201ENST00000436466 2618 ntBASIC13□□□□□ -0.33
LYSMD2Q8IV50 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 AL671277.1-201ENST00000429656 993 ntBASIC13□□□□□ -0.33
LYSMD2Q8IV50 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 RNA5SP419-201ENST00000515908 135 ntBASIC13□□□□□ -0.33
LYSMD2Q8IV50 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 PDPK2P-202ENST00000562415 1191 ntBASIC13□□□□□ -0.33
LYSMD2Q8IV50 AL135744.1-201ENST00000565098 629 ntBASIC13□□□□□ -0.33
LYSMD2Q8IV50 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 AC064836.3-201ENST00000607928 673 ntBASIC13□□□□□ -0.33
LYSMD2Q8IV50 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 FAM90A11P-201ENST00000518378 2218 ntBASIC13□□□□□ -0.33
LYSMD2Q8IV50 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSMD2Q8IV50 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LYSMD2Q8IV50 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AL355102.3-201ENST00000554299 1678 ntBASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AC060814.4-201ENST00000594169 2163 ntBASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.99□□□□□ -0.33
LYSMD2Q8IV50 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms