Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AC136759.1-202ENST00000530858 2194 ntBASIC15.17■□□□□ 0.02
CASC4Q6P4E1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 MYCLP2-201ENST00000449268 967 ntBASIC15.16■□□□□ 0.02
CASC4Q6P4E1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.16■□□□□ 0.02
CASC4Q6P4E1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 CICP4-201ENST00000447359 2812 ntBASIC15.16■□□□□ 0.02
CASC4Q6P4E1 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASC4Q6P4E1 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 AL391825.1-201ENST00000457671 1364 ntBASIC15.15■□□□□ 0.02
CASC4Q6P4E1 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 AC087499.6-201ENST00000411576 835 ntBASIC15.15■□□□□ 0.02
CASC4Q6P4E1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 AC098850.1-201ENST00000419919 790 ntBASIC15.15■□□□□ 0.02
CASC4Q6P4E1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms