Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 AC104457.1-201ENST00000401024 814 ntBASIC11.21□□□□□ -0.61
MRPL54Q6P161 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 IGLL3P-201ENST00000412472 434 ntBASIC11.21□□□□□ -0.61
MRPL54Q6P161 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 AC073648.2-201ENST00000510116 352 ntBASIC11.21□□□□□ -0.61
MRPL54Q6P161 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 AC015910.1-201ENST00000579400 975 ntBASIC11.21□□□□□ -0.61
MRPL54Q6P161 RN7SL850P-201ENST00000579959 291 ntBASIC11.21□□□□□ -0.61
MRPL54Q6P161 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.21□□□□□ -0.62
MRPL54Q6P161 LINC00567-201ENST00000569854 3409 ntBASIC11.21□□□□□ -0.62
MRPL54Q6P161 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL54Q6P161 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL54Q6P161 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 AC108751.1-201ENST00000490852 363 ntBASIC11.2□□□□□ -0.62
MRPL54Q6P161 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.2□□□□□ -0.62
MRPL54Q6P161 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms