Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 GCOM2-201ENST00000509133 1104 ntBASIC13.82□□□□□ -0.2
REEP3Q6NUK4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 AL132655.2-201ENST00000596276 594 ntBASIC13.82□□□□□ -0.2
REEP3Q6NUK4 AC004466.1-201ENST00000599515 1080 ntBASIC13.82□□□□□ -0.2
REEP3Q6NUK4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 AC087386.2-201ENST00000623212 4637 ntBASIC13.82□□□□□ -0.2
REEP3Q6NUK4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
REEP3Q6NUK4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 AL162726.2-201ENST00000438986 1017 ntBASIC13.81□□□□□ -0.2
REEP3Q6NUK4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 CLUHP6-201ENST00000580789 941 ntBASIC13.81□□□□□ -0.2
REEP3Q6NUK4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms