Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 AC089987.1-201ENST00000551654 2209 ntBASIC11.43□□□□□ -0.58
HIST1H1AQ02539 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 REXO1L1P-201ENST00000379010 6598 ntBASIC11.43□□□□□ -0.58
HIST1H1AQ02539 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 AC106028.4-201ENST00000614509 607 ntBASIC11.43□□□□□ -0.58
HIST1H1AQ02539 AC139530.3-201ENST00000620344 690 ntBASIC11.43□□□□□ -0.58
HIST1H1AQ02539 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.43□□□□□ -0.58
HIST1H1AQ02539 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 LILRP1-201ENST00000444199 1370 ntBASIC11.42□□□□□ -0.58
HIST1H1AQ02539 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AC104457.1-201ENST00000401024 814 ntBASIC11.42□□□□□ -0.58
HIST1H1AQ02539 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AC093512.1-201ENST00000617969 520 ntBASIC11.42□□□□□ -0.58
HIST1H1AQ02539 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms