Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.99□□□□□ -0.49
CX3CL1P78423 AC015936.2-201ENST00000593177 259 ntBASIC11.99□□□□□ -0.49
CX3CL1P78423 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.99□□□□□ -0.49
CX3CL1P78423 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CX3CL1P78423 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CX3CL1P78423 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.99□□□□□ -0.49
CX3CL1P78423 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CX3CL1P78423 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 AC023090.2-201ENST00000625182 2110 ntBASIC11.99□□□□□ -0.49
CX3CL1P78423 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.99□□□□□ -0.49
CX3CL1P78423 CICP20-201ENST00000443330 2801 ntBASIC11.99□□□□□ -0.49
CX3CL1P78423 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.99□□□□□ -0.49
CX3CL1P78423 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.99□□□□□ -0.49
CX3CL1P78423 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CX3CL1P78423 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CX3CL1P78423 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CX3CL1P78423 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CX3CL1P78423 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.98□□□□□ -0.49
CX3CL1P78423 COX5BP8-201ENST00000416911 349 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 NME2P1-201ENST00000426182 414 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AL355864.2-201ENST00000447420 863 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC026434.2-201ENST00000506094 1078 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC132938.2-201ENST00000579188 680 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.98□□□□□ -0.49
CX3CL1P78423 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC145423.3-201ENST00000615987 467 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 AL591163.1-201ENST00000641757 987 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CX3CL1P78423 AC018529.2-202ENST00000611482 3087 ntBASIC11.98□□□□□ -0.49
CX3CL1P78423 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.98□□□□□ -0.49
CX3CL1P78423 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
CX3CL1P78423 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms