Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC073957.3-201ENST00000609998 6758 ntBASIC14.55□□□□□ -0.08
GTF2A1P52655 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
GTF2A1P52655 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC14.55□□□□□ -0.08
GTF2A1P52655 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GTF2A1P52655 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC14.55□□□□□ -0.08
GTF2A1P52655 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.55□□□□□ -0.08
GTF2A1P52655 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC14.54□□□□□ -0.08
GTF2A1P52655 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.54□□□□□ -0.08
GTF2A1P52655 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 AL805961.2-201ENST00000642139 4817 ntBASIC14.54□□□□□ -0.08
GTF2A1P52655 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GTF2A1P52655 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GTF2A1P52655 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 NTM-206ENST00000427481 2583 ntTSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GTF2A1P52655 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.53□□□□□ -0.08
GTF2A1P52655 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.53□□□□□ -0.08
GTF2A1P52655 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 IER3-202ENST00000376377 1350 ntBASIC14.53□□□□□ -0.08
GTF2A1P52655 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.53□□□□□ -0.08
GTF2A1P52655 AC136604.1-202ENST00000425471 771 ntBASIC14.53□□□□□ -0.08
GTF2A1P52655 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
GTF2A1P52655 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.53□□□□□ -0.08
GTF2A1P52655 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.53□□□□□ -0.08
GTF2A1P52655 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.53□□□□□ -0.08
GTF2A1P52655 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.53□□□□□ -0.08
GTF2A1P52655 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.53□□□□□ -0.08
GTF2A1P52655 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 AF228730.7-201ENST00000641842 219 ntBASIC14.53□□□□□ -0.08
GTF2A1P52655 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 AC087164.2-201ENST00000624514 3130 ntBASIC14.53□□□□□ -0.08
GTF2A1P52655 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GTF2A1P52655 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GTF2A1P52655 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC14.53□□□□□ -0.08
GTF2A1P52655 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.52□□□□□ -0.08
GTF2A1P52655 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GTF2A1P52655 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GTF2A1P52655 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GTF2A1P52655 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GTF2A1P52655 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC14.52□□□□□ -0.08
GTF2A1P52655 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms